Enum: ReactionMechanismEnum
The kinetic rate law (mechanism) used to model how a reaction's rate depends on metabolite concentrations and kinetic parameters. These values align with the mechanism types used by kinetic-modeling tools such as Maud.
URI: chemrof:ReactionMechanismEnum
Permissible Values
| Value | Meaning | Description |
|---|---|---|
| reversible_michaelis_menten | None | A reversible (modular) Michaelis-Menten rate law, sensitive to both substrate... |
| irreversible_michaelis_menten | None | An irreversible Michaelis-Menten rate law, treating the reaction as effective... |
| mass_action | None | Elementary mass-action kinetics, where rate is proportional to the product of... |
| drain | None | A boundary or exchange pseudo-reaction that supplies or removes a metabolite ... |
Slots
| Name | Description |
|---|---|
| reaction_mechanism | The kinetic rate law (mechanism) used to model the rate of the reaction, e |
Identifier and Mapping Information
Schema Source
- from schema: https://w3id.org/chemrof
LinkML Source
name: ReactionMechanismEnum
description: The kinetic rate law (mechanism) used to model how a reaction's rate
depends on metabolite concentrations and kinetic parameters. These values align
with the mechanism types used by kinetic-modeling tools such as Maud.
title: reaction_mechanism_enum
from_schema: https://w3id.org/chemrof
rank: 1000
permissible_values:
reversible_michaelis_menten:
text: reversible_michaelis_menten
description: A reversible (modular) Michaelis-Menten rate law, sensitive to both
substrate and product concentrations and to thermodynamics.
irreversible_michaelis_menten:
text: irreversible_michaelis_menten
description: An irreversible Michaelis-Menten rate law, treating the reaction
as effectively one-directional.
mass_action:
text: mass_action
description: Elementary mass-action kinetics, where rate is proportional to the
product of reactant activities.
drain:
text: drain
description: A boundary or exchange pseudo-reaction that supplies or removes a
metabolite at a fitted rate, rather than a mechanistic enzyme-catalyzed step.