Slot: has part (has_part)
basic parthood relations
URI: BFO:0000051 Alias: has_part
Inheritance
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| MolecularCation | A polyatomic ion that is positive | no |
| Peptide | no | |
| Monosaccharide | A polyhydroxy aldehyde or ketone, or a compound derived from one, that cannot... | no |
| SmallMolecule | A molecule characterized by availability in small-molecule databases | no |
| PartiallySpecifiedAtom | An atom type that only has a subset of properties (has atomic number, charge,... | no |
| Macromolecule | A large molecule, such as a polymer, lipid, or macrocycle | no |
| UnchargedAtom | An atom type that has no charge | no |
| Homopolymer | a polymer with a single type of repeating unit | no |
| NaturalProduct | no | |
| PolyatomicIon | A molecule that has a net charge | no |
| Enantiomer | one of two stereoisomers of a chiral molecule that are mirror images | no |
| MonoatomicIon | An atom type that has a charge | no |
| Copolymer | a polymer with a more than one type of repeating unit | no |
| ChemicalElement | generic form of an atom, with unspecified neutron or charge | no |
| Protein | A macromolecule composed of one or more polypeptide chains of amino acids tha... | no |
| Isotope | A specific subtype of an atom with a specified neutron number | no |
| MonomolecularPolymer | A macromolecule composed of repeating subunits | no |
| Atom | A chemical entity consisting of exactly one atomic nucleus and the electron(s... | yes |
| Nuclide | an atomic species characterized by the specific constitution of its nucleus | no |
| MolecularAnion | A polyatomic ion that is negative | no |
| MoleculeByChargeState | A molecule that has a charge state specified | no |
| Glycan | A molecule consisting of monosaccharide residues joined to one another by gly... | no |
| NetUnchargedMolecule | A molecule that has no net charge | no |
| AtomIonicForm | an atom type in which only charge state is specified, designated by the eleme... | no |
| MoleculeGroupingClassDefinedByComponents | A grouping class defined as an exhaustive list of components | yes |
| AtomAnion | A monoatomic ion that is negative | no |
| Allotrope | A molecule consisting of atoms of the same element | no |
| Radionuclide | an atom that has excess nuclear energy, making it unstable | no |
| Stereoisomer | no | |
| FullySpecifiedAtom | An atom type that has atomic number, charge, and neutron number stated (equiv... | no |
| NeutralMolecule | A molecule that has no net charge and is not a zwitterion | no |
| AtomCation | A monoatomic ion that is positive, e | no |
| Molecule | A chemical entity that consists of two or more atoms where all atoms are conn... | yes |
| Isobar | Isobars are atoms (nuclides) of different chemical elements that have the sam... | no |
| Zwitterion | A molecule that has both a positive and negative charges but is net neutral | no |
| Ester | An ester is a chemical compound derived from an acid (organic or inorganic) i... | no |
| NonSpeciesMolecule | A molecule in which the units are not identical | no |
| MolecularSpecies | A molecule in which the units are identical | no |
Properties
- Range: String
Identifier and Mapping Information
Schema Source
- from schema: https://w3id.org/chemrof
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | BFO:0000051 |
| native | chemrof:has_part |
| exact | RO:0002131 |
| undefined | BFO:0000050, schema:hasBioChemEntityPart |
LinkML Source
name: has_part
description: basic parthood relations
title: has part
from_schema: https://w3id.org/chemrof
mappings:
- BFO:0000050
- schema:hasBioChemEntityPart
exact_mappings:
- RO:0002131
rank: 1000
is_a: chemical_to_chemical_relationship
slot_uri: BFO:0000051
alias: has_part
domain_of:
- MoleculeGroupingClassDefinedByComponents
- Molecule
- Atom
range: string