Slot: kegg chemical function representation (kegg_chemical_function_representation)

A multiline format used by the KEGG GLYCAN database and represents glycans as graphs. Monosaccharides are represented as nodes, and glycosidic linkages are represented as edges. Each node is given a unique number, and x- and y- coordinates are specified such that the glycan structure can be drawn on a 2D plane. Edge information uses the node numbers to specify anomeric and carbon number information. Monosaccharide names are specified as text, and no particular rules are specified to represent these names.

URI: chemrof:kegg_chemical_function_representation

Inheritance

• information_property
  • chemical_representation
    • carboydrate_representation
      • kegg_chemical_function_representation

Properties

• Range: ChemicalEncoding

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/chemrof

Mappings

Mapping Type	Mapped Value
self	chemrof:kegg_chemical_function_representation
native	chemrof:kegg_chemical_function_representation

LinkML Source

name: kegg_chemical_function_representation
description: A multiline format used by the KEGG GLYCAN database and represents glycans
  as graphs. Monosaccharides are represented as nodes, and glycosidic linkages are
  represented as edges. Each node is given a unique number, and x- and y- coordinates
  are specified such that the glycan structure can be drawn on a 2D plane. Edge information
  uses the node numbers to specify anomeric and carbon number information. Monosaccharide
  names are specified as text, and no particular rules are specified to represent
  these names.
title: kegg chemical function representation
from_schema: https://w3id.org/chemrof
rank: 1000
is_a: carboydrate_representation
domain: ChemicalEntity
alias: kegg_chemical_function_representation
range: ChemicalEncoding